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- 45 Mutualism
- 30 Symbiosis
- 27 Parasitism
- 26 Fungus
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- 15 symbiosis
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- 5 Cyanobacteria
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- 5 Legumes
- 5 Mycorryzae
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- 57 Clayton, Michael W.
- 44 University of Wisconsin-Madison
- 11 Cameron R. Currie
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- 2 Garret Suen
- 2 Lingjun Li
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1.
- Date
-
- 2021
- Collection
-
- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 81 matches
-
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page 27
- Corresponding to this, arbuscular mycorrhizal symbiosis has a vast host range.
- In contrast to AM symbiosis, RN symbiosis arose much more recently (De La Peña...
- As discussed earlier, RN symbiosis requires many of the same genes as AM symbiosis. The evolution of the root nodule symbiosis is therefore proposed to have...opted many genes from AM symbiosis.
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page 9
- viii Abstract Root nodule symbiosis and arbuscular mycorrhizal symbiosis serve as the two most agriculturally beneficial...
- ...referred to as the common symbiosis pathway. It’s likely that root nodule symbiosis arose from co-opting signaling mechanisms used in arbuscular mycorrhizal symbiosis.
- ...for forming root nodule and arbuscular mycorrhizal symbiosis through their activity at the nuclear level in the common symbiosis pathway.
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page 19
- 9 1.6 – Common symbiosis pathway In addition to the...the microbial partners in RN symbiosis and AM symbiosis, these symbioses share extreme similarity...signaling components necessary for RN symbiosis. Later research in AM symbiosis identified that the same components...
- ...which bind LCOs and serve in RN symbiosis are Lysin Motif Receptor-Like Kinase3 (LYK3) and...
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page 27
2.
- Date
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- 2019
- Collection
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- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 65 matches
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page 43
- ...transfer our knowledge of AM symbiosis to ECM symbiosis as it appears that some...to one or the other symbiosis (Fig. 4).
- ...establishment and maintenance of AM symbiosis far outweigh that of ECM symbiosis. For example, the role of...and...(COs) in ECM symbiosis is still debated, and no evidence indicate that the "common symbiosis pathway" required for the establishment of AM symbiosis is also needed in ECM...
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page 33
- ...consistently correlated with the loss of AM symbiosis.
- ...all of the genes in the common symbiosis pathway suggests that Pinaceae trees cannot form a bona fide AM symbiosis.
- ...finding strongly supports the idea that ECM symbiosis in Pinaceae does not rely on the common symbiosis pathway.
- ...possible that, in some lineages, the common symbiosis pathway was recruited to allow ECM symbioses...
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page 21
- ...signaling and metabolic pathways enabling arbuscular mycorrhizal symbiosis.
- ...genome uncovers evolutionary origins and mechanisms of symbiosis.
- ...of Laccaria bicolor provides insights into mycorrhizal symbiosis.
- LysM-type mycorrhizal receptor recruited for rhizobium symbiosis in nonlegume Parasponia.
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page 43
3.
- Date
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- 2025
- Collection
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- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 45 matches
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page 82
- Symbiosis also shows benefit for workloads...• Q: How quickly does Symbiosis react to workload changes and how much overhead does Symbiosis incur for simulation and changing cache sizes? A: Symbiosis adapts to workload changes in...• Q: How well does Symbiosis handle real-world workloads? A: Symbiosis’s gain holds consistently for real-world...
- We evaluate Symbiosis by comparing it with two static configurations:
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page 63
- 44 Chapter 3 Symbiosis: The Art of Application and Kernel Cache...In this chapter, we design and build Symbiosis to solve the cache partitioning problem for...
- ...guide the design, approximations, and optimizations of Symbiosis (§3.2).
- We thus design and implement Symbiosis to dynamically adjust cache sizes online according...
- We integrate Symbiosis into LevelDB, RocksDB, and WiredTiger, each within...
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page 81
- 62 3.3.3 Multiple Implementations Wehave integrated Symbiosis into three different storage engines: LevelDB [53],WiredTiger...and RocksDB [46]. Modifying LevelDB to leverage Symbiosis required adding fewer than 1000 LoC to...
- We have also ported Symbiosis to WiredTiger and RocksDB to demonstrate its...
- To study Symbiosis’s capability to handle an application-managed compressed data...
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page 82
4.
- Date
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- 2023
- Collection
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- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 50 matches
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page 91
- ...key players known to the fungus-growing ant symbiosis.
- ...forms, with one ubiquitous example being the symbiosis between microbes and their hosts.
- ...questions for the study of symbiosis involve both the identification of partners in symbiosis, as well as their ecological roles in the symbiosis.
- This symbiosis is structured by a nutritional mutualism between...
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page 3
- ii growing ant microbe symbiosis.
- ...of the biology of the fungus-growing ant-microbe symbiosis.
- ...examine metagenomes from the fungus growing ant symbiosis.
- ...learned from fungus-growing ants into another insect-fungus symbiosis encapsulated within the Azteca-Cecropia symbiosis.
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page 141
- ...more putative residents and guests of this symbiosis. However, the distribution of these microbes across the phylogenetic diversity of the symbiosis often isn’t characterized.
- ...to understanding how individual microbes impact the symbiosis.
- ...Candida yeast genomes isolated from the Azteca/Cecropia symbiosis.
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page 91
5.
- Date
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- 2021
- Collection
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- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 41 matches
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page 12
- ...the regulatory aspects of AM symbiosis and its effects are better...interaction. 1.3 - The Common symbiosis pathway The initial infection and...referred to as the common symbiosis pathway (CSP) (Figure 2) (Oldroyd,...
- ...the very same pathway for root nodule symbiosis (RNS).
- ...the evolutionary timelines that underscore RNS, AM symbiosis, and the CSP itself.
- ...hundreds of millions of years after AM symbiosis or the CSP itself (Remy et al.,...
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page 6
- ...1.2 - Arbuscular mycorrhizal symbiosis………………………………... 1.3 - The Common symbiosis pathway………………………………… 1.4 - Host specificity of common symbiosis pathway………………… 1.5 - Symbiosis genes in mosses and...Conserved components of the common symbiosis pathway regulate ABA levels and...
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page 16
- ...activation. 1.4 - Host specificity of common symbiosis pathway Many of the genes that function...non-host plant species, heretofore referred to as “symbiosis-specific” genes.
- ...family-wide losses of CSP genes, including the symbiosis-specific nuclear signaling proteins CCaMK and IPD3 (Delaux...ability to host AMF have still retained symbiosis-specific genes likely to maintain the ability to...
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page 12
6.
- Date
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- 2014
- Collection
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- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 77 matches
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page 27
- ...question driving my thesis is: how does symbiosis affect daily rhythms in the squid/vibrio symbiosis?
- ...of asking my particular question in the symbiosis the three day/night cycles are fairly divergent,...is a potential circadian regulator affected by symbiosis?
- ...in the initiation and maintenance of the symbiosis using qRT-PCR, immunocytochemistry, and bacterial growth inhibition...
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page 7
- ...2 Circadian Rhythms and Symbiosis...5 Day/Night Cycles in the Squid-Vibrio Symbiosis...8 Thesis Structure...cryptochrome gene in the squid–vibrio symbiosis...18 Preface...19...
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page 194
- Previously, it had been shown that symbiosis increases the microvillar density of cells in...the ducts of the light organ upon symbiosis onset (Kimbell and McFall-Ngai, 2004).
- ...juvenile animals, but is not dependent upon symbiosis.
- ...of the microvillar border is dependent upon symbiosis, as aposymbiotic animals regrow the microvillar border...least in the first few days of symbiosis (Fig. 5-8).
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page 27
7.
- Date
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- 2019
- Collection
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- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 63 matches
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page 6
- ...fidelity in an ancient host-microbe symbiosis…………………………....i Dissertation...Table of...1.2 Fungus-growing ant multi-partite symbiosis as a...1.2.1 Multipartite symbiosis………………………………………………………………………...3 1.2.2 Coevolutionary dynamics within the fungus-growing ant symbiosis…………………….…...6 1.3 Small molecules: the language...to characterize antibiotic-mediated...1.4 Symbiosis as a...1.4.1 Insect-microbe...Chemistry in the fungus-growing ant symbiosis…………………………………………….11 1.4.3 Other model insect-microbe defensive...in the leaf-cutter ant defensive symbiosis……….……………15 1.6...1.7...Chapter...
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page 177
- Joy JB (2013) Symbiosis catalyses niche expansion and diversification.
- Moran NA (2007) Symbiosis as an adaptive process and source of...
- ...and evolution of bacteriocytes in the aphid-Buchnera symbiosis.
- ...MJ (2004) The winnowing: Establishing the squid–Vibrios symbiosis.
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page 13
- ...we discuss a model multipartite symbiosis and pose questions to further...of microbial interactions within a symbiosis. 1.2 Fungus-growing ant multi-partite symbiosis as a model 1.2.1 Multipartite symbiosis Fungus-growing ants (subtribe Attina) participate in an ancient, multi-partite symbiosis whose microbial associations span from...
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page 6
8.
TextHost-symbiont specificity: Exploring the dynamics of leaf-cutter ant-Pseudonocardia associations
- Date
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- 2014
- Collection
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- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 48 matches
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page 21
- As researchers continue to explore this complex symbiosis undoubtedly additional symbionts will continue to be...
- ...make this an excellent system to study symbiosis.
- ...role of specificity in the leaf-cutter ant-Pseudonocardia symbiosis.
- ...the breadth of the Pseudonocardia- fungus-growing ant symbiosis.
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page 105
- 98 ant symbiosis. This suggests a conserved pathway across symbiosis, however dissimilarities could arise due to experimental...
- ...powerful evolutionary insights to the study of symbiosis.
- ...elucidate more of the first principles of symbiosis as well as practical applications from this...
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page 22
- ...generalizable knowledge about the large field of symbiosis and what theoretical first principles might be...
- ...conclude with thoughts on future directions in symbiosis research.
- ...development of the host in the squid-vibrio symbiosis.
- ...Acromyrmex leaf-cutting ants: potential for a nutritional symbiosis.
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page 21
9.
- Author
- Hutcheson, Emily S.
- Date
-
- 2023
- Collection
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- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 45 matches
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page 43
- ...Bernhard Frank coined the term ‘symbiosis’ to describe the coexistence of...necessarily antagonistic.70 De Bary viewed symbiosis as a collective term encompassing...parasitism as “a manifestation” of symbiosis, where the nourishment of one...by Association: A History of Symbiosis, 5. 68 Jan Sapp, Evolution by Association: A History of Symbiosis, New York: Oxford University Press,...by Association: A History of Symbiosis, 6. 70 De Bary gave a lecture on symbiosis, "Die Erscheinung der Symbiose" (“The appearance of symbiosis”) in 1878, published in 1879.
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page 33
- ...of these investigators demonstrates how symbiosis drew attention from researchers but...This left deeper study of symbiosis to less established investigators. In...used prize questions related to symbiosis to sift for their brightest...
- ...nineteenth and twentieth century saw symbiosis as interesting, but orthogonal to...acceptance of the view of symbiosis as a primordial character of...by Association: A History of Symbiosis, New York: Oxford University Press,...
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page 32
- ...new lexicon for describing these species interactions. Symbiosis—the umbrella term for these intimate ecological relationships...
- On occasion, some scientists used “symbiosis” to mean mutualism. As both zoologists and botanists pursued these symbiosis studies, they found recurring instances of animals...
- ...Sapp, Evolution by Association: A History of Symbiosis, New York: Oxford University Press, 1994, 5.
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page 43
10.
- Date
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- 2020
- Collection
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- UW-Madison Dissertations and Theses
- Media
- 1 pdf
- 32 matches
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page 44
- They examined the symbiosis behavior, conserved genes, and symbiosis specific genes found in the common symbiosis pathway between the hosts of...grandii all shared the same symbiosis behavior from arbuscular mycorrhizal fungi...and CCD8); and the same symbiosis specific genes (Garcia et al.,...LCOs and trigger the common symbiosis pathway in Medicago truncatula. Cope...LCOs, which triggered the common symbiosis pathway in Populus trichocarpa.
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page 28
- To understand the activation of the common symbiosis pathway by COs and LCOs produced by...
- ...and COs from Rhizophagus intraradices, the common symbiosis pathway (discussed in section 1.2.2-Recognition between symbiotic...
- ...R. intraradices induce signaling of the common symbiosis pathway in both Medicago truncatula and Oryza...Ané, 2011). Moreover, regulation of the common symbiosis pathway by ethylene production in both monocots...
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page 68
- ...hosts have been studied as the nitrogen-fixing symbiosis between rhizobia and legumes that leads to...
- ...by their legume host and initiate the symbiosis.
- ...are not only affected in the rhizobium-legume symbiosis but also associations with arbuscular mycorrhizal fungi...symbioses and the existence of a "common symbiosis pathway"(3).
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page 44
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